CDS

Accession Number TCMCG066C12435
gbkey CDS
Protein Id XP_034587540.1
Location join(21109219..21109952,21111792..21112139,21112215..21112445,21112655..21112780,21112857..21113190,21113265..21113422,21113622..21113779,21113975..21114096,21114199..21114333,21115889..21116013,21116220..21116324,21117181..21117414,21118162..21118495,21118895..21119083,21119159..21120715)
Gene LOC117849912
GeneID 117849912
Organism Setaria viridis

Protein

Length 1629aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034731649.1
Definition E3 ubiquitin-protein ligase KEG [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category T
Description E3 ubiquitin-protein ligase KEG
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K16279        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.7.11.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005769        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009738        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009788        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901420        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905958        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGGGTGCCGTGCTGCTCGCTGTGCAACGTCCGGTACGACGAGGATGAGCGGACGCCGCTGCTCCTCCACTGCGGCCACGGCTTCTGCCGCGCGTGCCTCTCCCGCATGCTCGCGGCCGCCCCCGGCGCCACGCTGCCGTGCCCGCGGTGCCGCCACCTGACCGCCGTCGGCAACTCCGTCTCCGCGCTGCGGAAGAACTTCCCCATCCTATCGCTACTCTCCGCGTCCCCATCATCCCCCTCCTTCCTCCACTCTGACTCGGGATCATCCTCCGACGGCTCTGACGACGAGGACGACTTCTTCGCGCGCCCCAGCCGCCGTCCCGCGTCAGCGCCCGCTGCCCCGCCGCCCGGATGCAGCTCGTTCGACCTTGCCTCGCACCCGGACCTCAAGCTCGCCCGCCGCATCGGGAGTGGCCCGCCTGGGCCTGCCGGGCAGGAGGTGTGGGCCGGCACGCTGTCCCGTGGTGGCCGTGGCAGTGGGGCCAAGCGGTGCAAGCACCAGGTGGCGGTGAAGAGGGTGCCCGTGGCCGCAGGGGACGGGCTTGAGGGGGTTCAAGAGGAGGTGGAGCGGCTGAGACGCGCCTCCACATGGTGTCGGAACGTGTGCGCATTCCATGGTACAGTAAGGGTCGGCGGCCACCTCTGCTTCGTGATGGATCGCTATGCGGGGTCTGTGCAGGCAGAGATGCGACAAAATGGTGGACGGCTCACGCTGGAGCAGATTCTCAGGTATGGAGCAGATATTGCCCGTGGAGTAGCAGAACTCCATGCAGCGGGTATTGTTTGTATGAGCATAAAGCCATCGAACATTCTTTTGGATGCAAGTGGACGTGCTGTTGTTTCAGATTACGGTCTTTCAGCAATTTTGAAGAACCTTACTAGTAGGAAAGTACCTGATGACTCCAGTGCCGGCATTGATGCTACACTGCTTAGTCCCAATTATACAGCTCCGGAGGCATGGGGACCATTGAAGAAGTCATTGAATATGTTTTGGGATAGTGCAAACGGCATATCACCAGAGTCAGATGCATGGAGTTTCGGTTGCACACTTGTGGAAATGTGTACTGGTGCTGTTCCATGGGCTGGGCTAAGTGCAGAGGAAATCTGTAAGTCTGTTGTAAAAGAAAAGAAGCCACCGCCTCAATATTCAAGAGTAGTAGGTGTAGGACTTCCTGGGGAGTTGTGGAAGATGATAGGTGATTGTTTGCAGTTCCGAGCTTCTAGAAGACCATCCTTCCAGGACATGCTAAAAACTTTTCTCCGACATCTTCTGGACATACCACGGAGCCCGCCTGCTAGTCCTGAGAATGATTTCCCAAATGAAAGCTTGCCCAATGGCATAGAACCTCCAACAACCTCCATCCAGGAGATGGTTCATGATAATCCAAATGCCTTACATCGTTTTGTATGTGAAGGAGATGCTGCTGGTGTTAGGGATCTACTTGCAAAGGCCGCATCAGAGAGAAATGGTAGTTTGATTCGTTCTCTCTTAGAAGCACAAAATACAGATGGGCACACTGCCTTACATTTAGCATGCCGCCGAGGCTCAGCAGAGCTTGTGGAAGCTATTGTGGCTTACCAAGAGAATGTAGACATATTAGATAAGGATGAAGACCCTCCTATAGTTTTTGCTTTGGCTGCTGGCTCTCCTCGATGTGTTCGTGCACTTGTAGGCAGGTCTTCTTGTATCAATTCTAGGCTTAGAGAAGGCCTGGGTCCTACTCTTGCCCACGTCTGTGCCCATCATGGTCAACCGGAGTGCATGCAAGAGCTGCTGATTGCTGGAGCTGATCCTAATGCAGTAGATGGAGAAGGTGAATCTGTCCTGCATATTGCTGTGGCCAGGAGATATACTGATTGTGCTATTGTCATACTGGAAAATGGAGGCTGCAGATCGATGGGCATACCAAATTCTCAACATAAAACGCCATTGCATCTATGTATTGAAACATGGAACACTGCTGTGGTGAGAAGATGGGTTGAAGTTGCATCTTTAGAGGAGATAGCAGAAGCGATTGATGTACCCAGCCCTGTTGGGACAGCTTTATGCATGGCAGCAGCTCTTAAAAAGGAGCACGAGAAAGAGGGTCGAGAGTTAGTAAGAACATTGCTCGCTGTTGGTGCTGATCCTACAGCACAAGACGATCCACACTGTAGAACTGCATTACATACTGCAGCAATGATCGATGACGTGGAGCTGGTTAAGATCATACTGGAAGCAGGAGTTGATGTAAATATAAGAAATGCTCAAAATACAACCCCACTCCATGTTGCACTCAACAGAGGTGCAAACTCATGTGTTGGCTTGCTTTTGGCAGCTGGAGCAAACTGCAACATACAGGATGATGATGGTGACAATGCTTTTCATATAGCTGCTGATGCAGCAAAAATGATACGTGAAAACATGACTTGGATTGTCCAAATGCTACAACAGCCGTCACCTGCTGTTGATGTGAGAAACCACCGAGGCTGGACACTAAGAGATTTTCTTGAGAGGCTTCCACGAGAATGGATTTATGAAGAATTGATGGAAACACTTGAAGATAAAGGAGTTCATCTTTCCCCAACCATATACGAAGTTGCGGATTGGGTGAAATTTAGAAGAACTGTCACTTCACCGGCTTTTGGTTGGCAAGGTGCAGGACCCAGAAGCATTGGTTTTGTCCAGTCTATTGTAGACAATGACCACCTTGTTGTGTCATTTTGTACTGGAGAAGCACGTGTTTTGACAAGTGAAGTTATCAAAGTCATTCCATTAAATAGGGGCCAACATGTGCAGCTCAAGCCAGATGTTCCAGAACCTAGATTTGGATGGCGCGGTCAGTCGCGGGATAGCATTGGGACGGTTCTCTGTGTTGATGATGATGGAATCTTGAGGGTTGGTTTCCCAGGAGCTTCCAGGGGATGGAGAGCTGATCCTGCTGAGATTGAAAGGGTTGAAGAATATAAGGTTGGTAACTGGGTTCGGATTCGTCCCTCGCTAACAGTTGCTGTACATGGCATGGAGTCTATTACTCCTGGAAGTGTTGGTATTGTATACTCCATCAGACCAGATAGCAGTCTTCTATTGGGCCTTTGCTATTTGTCCAATCCATGGTTGTGTGAACCAGAGGAGGTCGAACATGTTGACCCATTCAAGATTGGCGACCAAGTATGCGTAAAGAGGTCTGTCGCAGAACCCAGATATGCATGGGGTGGGGAGACCCATCACAGTGTGGGGAAAATAATTGACATCGAGAGTGATGGTCTGCTCATCATAGATATTCCTAATCGGGCTGCACCATGGCAAGCAGATCCATCAGACATGGAGAAGATTGAGAACTTTAAGGTTGGTGATTGGGTTAGAGTTAAAGCAACAGTACCTTCACCCAAATATGGATGGGAGGATGTGACTCGTAATAGTATTGGAATAGTGCATAGTCTACAAGATGATGGGGATGTTGGTATTGCTTTCTGCTTCAGAAGCAAGCTTTTTCTTTGTTCTGTTGCAGATGTGGAGAAGGCACAGCCATTTGAGGTAGGGGAAAAAGTTCATGTGTCACCTTCCATATCTCAGCCACGCCTTGGATGGTTGAATGAAACTGCAGCAACCATTGGAGCCATAGCGAGGATTGACATGGATGGGACTTTAAATATCAAGGTTTCTGGCCGAAAAAGTTTATGGAAGGTTGCTCCTGGTGATGCTGAGAGGCTTTCAGCTTTTGAGGTTGGAGACTGGGTCCGCCAAAAACCAAGTATTGGGAGCAGACCTACCTATGACTGGAACAGTATTGGCAGAATAAGCATTGCAGTAGTCCACAGCATCCAGGACTCTGGTTACTTGGAGTTAGCTGGTTGCTTCAGGAATGGGAAATGGTTAACTCATAACACAGACATTGAGAAGGTAGAGTCCTTTAAGATAGGTCAGCATGTTCGGTTCCGTGCTGGAATTTCAGAGCCTAGATGGGGATGGAGAGATGCGAGGCCTGATTCTAGAGGCATAATCGCTGGTGTACATGCTGACGGAGAAGTTAGGGTTGCCTTCTTTGGTGTGCCTGGATTGTGGAGAGGTGATCCTGCAGATCTTGAAATTGAGAAAATATTTGAGGTTGGAGAGTGGGTTAGGCTGCGGAATGATGCGGATCAATGGAGATCTCTCAGGCCTGGTAGCATTGGTGTGGTGCATGGGGTGGGATATCAAGGTGATGTTTGGGATGGAACCATTCATGTGGCTTTTTGTGGTGAGCAGGAAAGGTGGATAGGGCCTTCTAGCCAGCTTGAAGGAGTTAGCAAGTTTGTTGTTGGGCAGCGTGTTCGAATCAGAGGTTGTATCCGCCAGCCAAGATTTGGTTGGTCTAATCATAATCATTTGAGTATAGGGACAATCTCATCAATTGACGCTGATGGGAAGTTAAGGATTCACACCCCAGCTGGTGCCAGGGCTTGGTTGATAGACCCAGCAGAGGTGGAGAAAGTGGAGGAAGAGGAAGAAATCTGTGTTGGGGACTGGGTGAAGGTTAAGGACTCCATTGCAACCCCAACATATCAATGGGGTGATGTGAACCACAACAGCATAGGGGTGGTCCATCGGGCTGATGATGGAGAGCTCTGGATTGCTTTCTGCTTCTGTGAGAGACTATGGTTGTGCAAAGCGTGGGAGGTGGAAAAGGTGAGGCCCTTCCGACAAGGTGATAAAGTACGGATACGACCTGGTCTTGTATCCCCCAGGTGGGGTTGGGGGATGGAGACCTATGCGAGCAAAGGCGAGGTTATAGGTGTCGATGCAAATGGAAAGCTGAGGATCAAATTTCGGTGGAGGGATAGACTTTGGATCGGGGACCCTGCTGATATCATTCTTGATGACGCCCCCTCACTGACGGAGGCTCCTAATGGTTTTTTTTCATAG
Protein:  
MRVPCCSLCNVRYDEDERTPLLLHCGHGFCRACLSRMLAAAPGATLPCPRCRHLTAVGNSVSALRKNFPILSLLSASPSSPSFLHSDSGSSSDGSDDEDDFFARPSRRPASAPAAPPPGCSSFDLASHPDLKLARRIGSGPPGPAGQEVWAGTLSRGGRGSGAKRCKHQVAVKRVPVAAGDGLEGVQEEVERLRRASTWCRNVCAFHGTVRVGGHLCFVMDRYAGSVQAEMRQNGGRLTLEQILRYGADIARGVAELHAAGIVCMSIKPSNILLDASGRAVVSDYGLSAILKNLTSRKVPDDSSAGIDATLLSPNYTAPEAWGPLKKSLNMFWDSANGISPESDAWSFGCTLVEMCTGAVPWAGLSAEEICKSVVKEKKPPPQYSRVVGVGLPGELWKMIGDCLQFRASRRPSFQDMLKTFLRHLLDIPRSPPASPENDFPNESLPNGIEPPTTSIQEMVHDNPNALHRFVCEGDAAGVRDLLAKAASERNGSLIRSLLEAQNTDGHTALHLACRRGSAELVEAIVAYQENVDILDKDEDPPIVFALAAGSPRCVRALVGRSSCINSRLREGLGPTLAHVCAHHGQPECMQELLIAGADPNAVDGEGESVLHIAVARRYTDCAIVILENGGCRSMGIPNSQHKTPLHLCIETWNTAVVRRWVEVASLEEIAEAIDVPSPVGTALCMAAALKKEHEKEGRELVRTLLAVGADPTAQDDPHCRTALHTAAMIDDVELVKIILEAGVDVNIRNAQNTTPLHVALNRGANSCVGLLLAAGANCNIQDDDGDNAFHIAADAAKMIRENMTWIVQMLQQPSPAVDVRNHRGWTLRDFLERLPREWIYEELMETLEDKGVHLSPTIYEVADWVKFRRTVTSPAFGWQGAGPRSIGFVQSIVDNDHLVVSFCTGEARVLTSEVIKVIPLNRGQHVQLKPDVPEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWRADPAEIERVEEYKVGNWVRIRPSLTVAVHGMESITPGSVGIVYSIRPDSSLLLGLCYLSNPWLCEPEEVEHVDPFKIGDQVCVKRSVAEPRYAWGGETHHSVGKIIDIESDGLLIIDIPNRAAPWQADPSDMEKIENFKVGDWVRVKATVPSPKYGWEDVTRNSIGIVHSLQDDGDVGIAFCFRSKLFLCSVADVEKAQPFEVGEKVHVSPSISQPRLGWLNETAATIGAIARIDMDGTLNIKVSGRKSLWKVAPGDAERLSAFEVGDWVRQKPSIGSRPTYDWNSIGRISIAVVHSIQDSGYLELAGCFRNGKWLTHNTDIEKVESFKIGQHVRFRAGISEPRWGWRDARPDSRGIIAGVHADGEVRVAFFGVPGLWRGDPADLEIEKIFEVGEWVRLRNDADQWRSLRPGSIGVVHGVGYQGDVWDGTIHVAFCGEQERWIGPSSQLEGVSKFVVGQRVRIRGCIRQPRFGWSNHNHLSIGTISSIDADGKLRIHTPAGARAWLIDPAEVEKVEEEEEICVGDWVKVKDSIATPTYQWGDVNHNSIGVVHRADDGELWIAFCFCERLWLCKAWEVEKVRPFRQGDKVRIRPGLVSPRWGWGMETYASKGEVIGVDANGKLRIKFRWRDRLWIGDPADIILDDAPSLTEAPNGFFS